STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RKC5_PETMACyclic nucleotide-binding domain-containing protein. (407 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
   
 
 0.843
S4R9C4_PETMA
Uncharacterized protein.
   
 0.798
S4RHR0_PETMA
Protein kinase domain-containing protein.
   
 0.798
S4RI01_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.798
S4R7R6_PETMA
Uncharacterized protein.
  
 
 0.746
S4RLH8_PETMA
SCP2 domain-containing protein.
  
 
 0.746
S4R6I4_PETMA
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.743
S4RTF2_PETMA
Glutamine synthetase.
   
 
 0.691
S4R485_PETMA
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.665
S4R5F8_PETMA
Argininosuccinate lyase.
    
 0.629
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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