STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RKE0_PETMAFamily with sequence similarity 149 member B1. (561 aa)    
Predicted Functional Partners:
S4RIB9_PETMA
Zgc:113333.
     
 0.858
S4RKW2_PETMA
Uncharacterized protein.
    
 0.808
S4RBH0_PETMA
Mannosyltransferase.
     
 0.804
S4RBC1_PETMA
Chitobiase, di-N-acetyl-; Belongs to the glycosyl hydrolase 18 family.
    
 0.801
S4RCH4_PETMA
Glyco_hydro_18 domain-containing protein.
    
 0.801
S4RNF1_PETMA
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
     
 0.799
S4RG08_PETMA
Fucosyltransferase 10.
    
 0.798
S4RRE0_PETMA
Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family.
    
 0.798
S4RVK6_PETMA
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.798
S4RD07_PETMA
Alpha-galactosidase.
   
 
 0.779
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.