Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RKF3_PETMATransmembrane protein 33. (178 aa)    
Predicted Functional Partners:
S4RW67_PETMA
Solute carrier family 30 member 9.
 
 
  
 0.723
S4RW13_PETMA
Hydroxysteroid (17-beta) dehydrogenase 12b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.709
S4RNH0_PETMA
Reticulon.
    
 
 0.686
S4RQ01_PETMA
Reticulon.
    
 
 0.686
TMEM43
Transmembrane protein 43.
    
 
 0.664
S4RWL1_PETMA
Uncharacterized protein.
   
  
 0.662
S4RG25_PETMA
Nucleoporin 133.
    
 
 0.643
S4RCM2_PETMA
Phosphofurin acidic cluster sorting protein 2.
      
 0.635
S4R7P4_PETMA
Family with sequence similarity 8 member A1b.
      
 0.614
S4RLR8_PETMA
N(alpha)-acetyltransferase 15, NatA auxiliary subunit b.
      
 0.609
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.