STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RKH9_PETMAGlyco_trans_2-like domain-containing protein; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily. (347 aa)    
Predicted Functional Partners:
S4R560_PETMA
Glucosaminyl (N-acetyl) transferase 3, mucin type.
     
 0.603
S4S1N5_PETMA
Glucosaminyl (N-acetyl) transferase 3, mucin type.
     
 0.603
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
     
 0.524
S4RNE5_PETMA
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.524
S4S0K0_PETMA
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.524
B3GNT3
Hexosyltransferase.
     
 0.508
B3GNT3-2
Hexosyltransferase.
     
 0.508
B3GNT3-3
Hexosyltransferase.
     
 0.508
S4RB23_PETMA
UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7.
  
0.500
S4RLH4_PETMA
Glyco_trans_2-like domain-containing protein.
 
     0.420
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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