STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HELTHelt bHLH transcription factor. (163 aa)    
Predicted Functional Partners:
S4RMQ1_PETMA
FA complementation group L.
    
  0.752
S4RV86_PETMA
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.744
CENPS-CORT
CENPS-CORT readthrough.
     
 0.610
S4RSW9_PETMA
Neuronal differentiation 1.
   
 0.581
NEUROG1
Neurogenin 1.
    
 0.572
S4RB78_PETMA
Uncharacterized protein.
    
 0.412
S4RBD7_PETMA
Uncharacterized protein.
    
 0.412
S4RBI9_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.412
S4RWR2_PETMA
Protein geranylgeranyltransferase type I, beta subunit.
    
 
 0.407
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.