STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARSLeucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (605 aa)    
Predicted Functional Partners:
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
 0.999
S4R4M7_PETMA
Uncharacterized protein.
  
 0.999
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
 0.998
S4R5V3_PETMA
tRNA-synt_1 domain-containing protein.
  
 0.994
S4R871_PETMA
Uncharacterized protein.
  
 0.964
S4RWF6_PETMA
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1a.
  
 0.959
S4R490_PETMA
tRNA-synt_1 domain-containing protein.
 
     0.949
S4RVJ0_PETMA
Lysine--tRNA ligase.
  
 0.946
S4RA74_PETMA
Isoleucyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.937
S4RHE8_PETMA
Methionyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.928
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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