STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RL37_PETMATroponin I type 2a (skeletal, fast), tandem duplicate 4. (155 aa)    
Predicted Functional Partners:
TNNT2
Troponin T type 2b (cardiac).
 
 0.996
S4RJ15_PETMA
Uncharacterized protein.
  
 0.995
S4RQ63_PETMA
Troponin T type 3a (skeletal, fast).
 
 0.995
S4RR41_PETMA
Uncharacterized protein.
   
 0.994
S4RIW3_PETMA
Si:rp71-17i16.4.
   
 0.990
S4RS77_PETMA
Myosin light chain 1.
   
 0.978
S4RRL2_PETMA
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.908
TPM4
Tropomyosin 1; Belongs to the tropomyosin family.
   
 0.906
S4RDY3_PETMA
Uncharacterized protein.
   
 0.906
TPM4-2
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.906
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.