STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RLC4_PETMASyntaxin 17. (306 aa)    
Predicted Functional Partners:
S4RUR1_PETMA
Synaptosome associated protein 29.
    
 0.999
S4R9K5_PETMA
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.973
S4RSG4_PETMA
VPS39 subunit of HOPS complex.
   
 
 0.972
S4R9P7_PETMA
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
   
 0.971
S4RTR2_PETMA
t-SNARE coiled-coil homology domain-containing protein.
    
 0.962
S4RIT6_PETMA
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.961
S4REN5_PETMA
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.955
ATG14
Autophagy related 14.
   
 0.954
S4RTF1_PETMA
V-SNARE coiled-coil homology domain-containing protein.
   
 0.929
S4RFD1_PETMA
N-ethylmaleimide-sensitive factor a; Belongs to the AAA ATPase family.
   
 0.900
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.