STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RLE7_PETMAUncharacterized protein. (247 aa)    
Predicted Functional Partners:
S4RYK6_PETMA
Ncstrn_small domain-containing protein.
   
 0.949
S4RAK4_PETMA
Presenilin enhancer, gamma-secretase subunit.
   
 0.943
S4RRQ1_PETMA
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
   
 0.941
S4RJF9_PETMA
Uncharacterized protein.
    
 0.749
S4RBQ0_PETMA
Uncharacterized protein.
    
 0.723
S4RHP3_PETMA
VWFD domain-containing protein.
    
 0.723
S4RAE8_PETMA
PNPLA domain-containing protein.
 
      0.672
S4R9M2_PETMA
ANK_REP_REGION domain-containing protein.
    
  0.637
S4RHN1_PETMA
Zgc:175264.
    
  0.621
MSL1
MSL complex subunit 1.
    
  0.621
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.