STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RLH8_PETMASCP2 domain-containing protein. (81 aa)    
Predicted Functional Partners:
S4RMV6_PETMA
Peroxisomal biogenesis factor 5.
   
 0.995
S4R7R6_PETMA
Uncharacterized protein.
 
 0.988
S4RA28_PETMA
Family with sequence similarity 185 member A.
    
 0.984
PEX14
Peroxisomal biogenesis factor 14.
    
 0.984
PEX14-2
Peroxisomal biogenesis factor 14.
    
 0.984
S4RLX5_PETMA
Peroxisomal biogenesis factor 13.
   
 
 0.983
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
 0.983
S4RHC9_PETMA
3-oxoacyl-ACP synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.972
S4RQV6_PETMA
Methylcrotonoyl-CoA carboxylase 2 (beta).
  
 0.967
S4RR37_PETMA
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.965
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.