S4RLV8_PETMA protein (Petromyzon marinus) - STRING interaction network

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Score

S4RLV8_PETMA

RNA polymerase II associated protein 1. (1433 aa)

Predicted Functional Partners:

S4RU77_PETMA

0.877

S4RJB6_PETMA

0.657

S4RLR2_PETMA

0.551

S4RKL4_PETMA

0.479

MED17

0.454

S4R997_PETMA

0.416

S4RQI3_PETMA

0.416

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MED17	S4RJB6_PETMA	ENSPMAP00000006083	ENSPMAP00000005298	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.991
MED17	S4RLR2_PETMA	ENSPMAP00000006083	ENSPMAP00000006148	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	RNA polymerase I and III subunit C.	0.951
MED17	S4RLV8_PETMA	ENSPMAP00000006083	ENSPMAP00000006194	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	RNA polymerase II associated protein 1.	0.454
S4R997_PETMA	S4RLV8_PETMA	ENSPMAP00000001778	ENSPMAP00000006194	Ring finger protein 41.	RNA polymerase II associated protein 1.	0.416
S4RJB6_PETMA	MED17	ENSPMAP00000005298	ENSPMAP00000006083	Polymerase (RNA) II (DNA directed) polypeptide C.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.991
S4RJB6_PETMA	S4RKL4_PETMA	ENSPMAP00000005298	ENSPMAP00000005747	Polymerase (RNA) II (DNA directed) polypeptide C.	TPR_REGION domain-containing protein.	0.606
S4RJB6_PETMA	S4RLR2_PETMA	ENSPMAP00000005298	ENSPMAP00000006148	Polymerase (RNA) II (DNA directed) polypeptide C.	RNA polymerase I and III subunit C.	0.775
S4RJB6_PETMA	S4RLV8_PETMA	ENSPMAP00000005298	ENSPMAP00000006194	Polymerase (RNA) II (DNA directed) polypeptide C.	RNA polymerase II associated protein 1.	0.657
S4RJB6_PETMA	S4RQI3_PETMA	ENSPMAP00000005298	ENSPMAP00000007469	Polymerase (RNA) II (DNA directed) polypeptide C.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.577
S4RJB6_PETMA	S4RU77_PETMA	ENSPMAP00000005298	ENSPMAP00000008767	Polymerase (RNA) II (DNA directed) polypeptide C.	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.868
S4RKL4_PETMA	S4RJB6_PETMA	ENSPMAP00000005747	ENSPMAP00000005298	TPR_REGION domain-containing protein.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.606
S4RKL4_PETMA	S4RLR2_PETMA	ENSPMAP00000005747	ENSPMAP00000006148	TPR_REGION domain-containing protein.	RNA polymerase I and III subunit C.	0.713
S4RKL4_PETMA	S4RLV8_PETMA	ENSPMAP00000005747	ENSPMAP00000006194	TPR_REGION domain-containing protein.	RNA polymerase II associated protein 1.	0.479
S4RKL4_PETMA	S4RQI3_PETMA	ENSPMAP00000005747	ENSPMAP00000007469	TPR_REGION domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.991
S4RKL4_PETMA	S4RU77_PETMA	ENSPMAP00000005747	ENSPMAP00000008767	TPR_REGION domain-containing protein.	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.401
S4RLR2_PETMA	MED17	ENSPMAP00000006148	ENSPMAP00000006083	RNA polymerase I and III subunit C.	Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.951
S4RLR2_PETMA	S4RJB6_PETMA	ENSPMAP00000006148	ENSPMAP00000005298	RNA polymerase I and III subunit C.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.775
S4RLR2_PETMA	S4RKL4_PETMA	ENSPMAP00000006148	ENSPMAP00000005747	RNA polymerase I and III subunit C.	TPR_REGION domain-containing protein.	0.713
S4RLR2_PETMA	S4RLV8_PETMA	ENSPMAP00000006148	ENSPMAP00000006194	RNA polymerase I and III subunit C.	RNA polymerase II associated protein 1.	0.551
S4RLR2_PETMA	S4RQI3_PETMA	ENSPMAP00000006148	ENSPMAP00000007469	RNA polymerase I and III subunit C.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.641