STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RM36_PETMAUncharacterized protein. (816 aa)    
Predicted Functional Partners:
S4R5Y6_PETMA
Uncharacterized protein.
   
 0.997
S4R693_PETMA
Uncharacterized protein.
   
 0.997
S4RAR1_PETMA
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
 0.997
S4RDF6_PETMA
Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents.
   
 0.997
S4REI7_PETMA
Ion_trans domain-containing protein.
   
 0.997
S4RFB6_PETMA
Zinc finger, MYND-type containing 10.
   
 0.997
S4RFT1_PETMA
Uncharacterized protein.
   
 0.997
S4RHE0_PETMA
Ion_trans domain-containing protein.
   
 0.997
S4RIL4_PETMA
Ion_trans domain-containing protein.
   
 0.997
S4RJA1_PETMA
Uncharacterized protein.
   
 0.997
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.