STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RMP0_PETMAATP synthase F1 subunit gamma. (273 aa)    
Predicted Functional Partners:
S4R4U1_PETMA
ATP synthase peripheral stalk subunit d.
   
 0.999
S4RBG8_PETMA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
S4RE88_PETMA
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
S4RMC6_PETMA
Uncharacterized protein.
 
 0.999
S4RR89_PETMA
ATP synthase F1 subunit delta.
  
 0.999
S4RTQ6_PETMA
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
S4RUR2_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.999
S4RVV1_PETMA
ATP synthase peripheral stalk-membrane subunit b.
   
 0.999
S4RYY5_PETMA
Ribosomal protein L11.
  
    0.999
ATP6
ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...]
  
 0.999
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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