STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PXMP4Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family. (212 aa)    
Predicted Functional Partners:
S4R9Y3_PETMA
Peroxisomal biogenesis factor 11 beta.
     
 0.804
S4RCQ9_PETMA
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.725
S4RLX5_PETMA
Peroxisomal biogenesis factor 13.
     
 0.716
ABCD1
ATP binding cassette subfamily D member 1.
     
 0.686
PEX3
Peroxisomal biogenesis factor 3.
     
 0.678
S4RAP4_PETMA
ATP-binding cassette, sub-family D (ALD), member 4.
   
 
 0.672
S4RYG8_PETMA
Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters.
     
 0.660
S4RZL9_PETMA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.649
PEX14
Peroxisomal biogenesis factor 14.
     
 0.597
PEX14-2
Peroxisomal biogenesis factor 14.
     
 0.597
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.