STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RMX0_PETMAUncharacterized protein. (150 aa)    
Predicted Functional Partners:
S4RMH4_PETMA
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.602
S4RJ48_PETMA
Centrosomal protein 135.
    
 
 0.582
S4RA33_PETMA
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.484
S4RLP9_PETMA
WD_REPEATS_REGION domain-containing protein.
      
 0.465
S4RQQ5_PETMA
Uncharacterized protein.
    
 
 0.455
S4RXF4_PETMA
Uncharacterized protein.
    
 
 0.455
S4RBC4_PETMA
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.443
S4RZ05_PETMA
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.443
GPR162
G protein-coupled receptor 153.
      
 0.424
S4RU10_PETMA
SMYLE_N domain-containing protein.
    
 
 0.415
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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