STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RN56_PETMAUncharacterized protein. (523 aa)    
Predicted Functional Partners:
S4RLV5_PETMA
WW domain-containing protein.
 
     0.933
S4RNZ3_PETMA
FERM domain-containing protein.
     
 0.696
S4RE86_PETMA
FERM domain containing 6.
     
 0.603
S4RMA7_PETMA
FERM domain containing 6.
     
 0.603
S4RS18_PETMA
FERM domain-containing protein.
     
 0.581
PTPN14
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily.
    
 
 0.534
S4RHA6_PETMA
Uncharacterized protein.
    
  0.494
S4RHW3_PETMA
Uncharacterized protein.
    
  0.494
S4RHX2_PETMA
Uncharacterized protein.
    
  0.494
S4RJB8_PETMA
Hydin_ADK domain-containing protein.
    
  0.494
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.