STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RP77_PETMADEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57. (927 aa)    
Predicted Functional Partners:
S4RR09_PETMA
Uncharacterized protein.
   
  0.859
S4RSK8_PETMA
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
 
  0.847
S4RY45_PETMA
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.814
S4RZ01_PETMA
Uncharacterized protein.
    
 0.795
S4RN48_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.772
S4R4K3_PETMA
Uncharacterized protein.
   
 0.762
S4R5N2_PETMA
WD repeat domain 46.
   
 0.759
S4RFG4_PETMA
AP complex subunit beta.
    
 0.755
S4RUY0_PETMA
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.755
S4REJ8_PETMA
NOP14 nucleolar protein homolog (yeast).
   
 0.751
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.