STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RPJ4_PETMAPseudouridine 5'-phosphatase. (243 aa)    
Predicted Functional Partners:
S4RTS3_PETMA
Riboflavin kinase.
   
 0.980
S4RWP3_PETMA
Protein-glucosylgalactosylhydroxylysine glucosidase.
  
 
 0.912
S4RX62_PETMA
Aminotran_5 domain-containing protein.
    
 0.897
S4RX49_PETMA
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
  
 
 0.887
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
   
 0.884
S4RGS8_PETMA
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.873
S4RVC9_PETMA
Protein YIPF.
    
 0.855
S4RNY9_PETMA
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family.
  
 0.828
ENSPMAP00000001833
annotation not available
    
 0.825
S4RUR2_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.822
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.