STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RPP5_PETMASi:ch211-269k10.2. (441 aa)    
Predicted Functional Partners:
S4RW83_PETMA
Uncharacterized protein.
 
      0.900
S4RW57_PETMA
Uncharacterized protein.
 
      0.893
S4RVU5_PETMA
Trio Rho guanine nucleotide exchange factor.
 
  
 
 0.886
S4RVI0_PETMA
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
  
   0.597
S4R4S5_PETMA
Rho related BTB domain containing 1.
    
 0.505
RHOC
Ras homolog family member C.
    
 0.505
S4R9E7_PETMA
Uncharacterized protein.
    
 0.505
S4RAG4_PETMA
Uncharacterized protein.
    
 0.505
S4RAH4_PETMA
Rho family GTPase 2.
    
 0.505
S4RC09_PETMA
Uncharacterized protein.
    
 0.505
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.