STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RPY8_PETMAPLAT domain-containing protein. (1067 aa)    
Predicted Functional Partners:
S4RF54_PETMA
NFACT-R_1 domain-containing protein.
    
 0.797
S4R9J1_PETMA
Polycystic kidney disease 2-like 1.
  
 
0.744
S4RPB7_PETMA
Polycystic kidney disease 2-like 1.
  
 
0.742
S4RC83_PETMA
Polycystic kidney disease 2.
  
 
0.741
S4RBQ2_PETMA
PKD_channel domain-containing protein.
  
 
0.731
S4RL40_PETMA
Exocyst complex component 5.
     
 0.545
S4RX27_PETMA
Exocyst complex component 4.
     
 0.509
S4R639_PETMA
RAB3A interacting protein (rabin3).
     
 0.508
S4R8I5_PETMA
Transient receptor potential cation channel, subfamily M, member 2.
      
 0.483
S4RWG8_PETMA
Nephronophthisis 1.
   
 
 0.473
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.