STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RQ64_PETMAUncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (549 aa)    
Predicted Functional Partners:
S4REN9_PETMA
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
 0.923
S4RVI7_PETMA
Growth factor receptor-bound protein 2a.
    
 0.909
S4RAH6_PETMA
Platelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family.
    
 0.889
S4RMX3_PETMA
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.877
S4RZX0_PETMA
Uncharacterized protein.
   
 0.877
S4RK08_PETMA
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 0.876
S4RGA1_PETMA
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 0.873
S4RTV4_PETMA
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.873
S4RPI3_PETMA
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
    
 0.870
S4RVD8_PETMA
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.866
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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