STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAB1NGFI-A binding protein 1. (288 aa)    
Predicted Functional Partners:
S4RIV4_PETMA
Uncharacterized protein.
    
 0.665
S4RIY0_PETMA
CHDNT domain-containing protein.
    
 0.621
PHF21A
PHD finger protein 21A.
    
 0.621
S4RRY4_PETMA
PHD-type domain-containing protein.
    
 0.621
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
    
  0.428
S4R663_PETMA
Uncharacterized protein.
    
  0.428
S4R6P8_PETMA
HSA domain-containing protein.
    
  0.428
S4R6R0_PETMA
Uncharacterized protein.
    
  0.428
S4R9C0_PETMA
RAD54 like 2.
    
  0.428
S4RDA9_PETMA
RAD54 homolog B.
    
  0.428
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.