STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RQH6_PETMAUncharacterized protein. (72 aa)    
Predicted Functional Partners:
S4R880_PETMA
Uncharacterized protein.
  
 
 0.599
S4R5Z1_PETMA
Uncharacterized protein.
   
 0.537
S4RH64_PETMA
Uncharacterized protein.
   
 0.537
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.447
S4R6E7_PETMA
PBPe domain-containing protein.
    
 0.435
S4R6Q5_PETMA
Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
 0.435
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
    
 0.435
S4RCV3_PETMA
Uncharacterized protein.
   
  0.404
S4RE08_PETMA
Uncharacterized protein.
   
  0.404
S4RHJ8_PETMA
Membrane palmitoylated protein 2; Belongs to the MAGUK family.
   
  0.404
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.