STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RQQ3_PETMABICD family like cargo adaptor 1. (426 aa)    
Predicted Functional Partners:
S4RTK4_PETMA
Dynactin 4.
    
   0.939
DCTN6
Dynactin subunit 6.
    
 
 0.899
S4RMQ9_PETMA
Actin related protein 10; Belongs to the actin family.
    
 
 0.897
S4RRQ6_PETMA
Dynactin 2 (p50).
    
   0.893
S4RJF2_PETMA
Sema domain-containing protein.
    
 0.810
S4RWV5_PETMA
Protein kinase domain-containing protein.
    
 0.810
S4RMT0_PETMA
Protein kinase domain-containing protein.
    
 0.766
S4RA27_PETMA
Dynein, cytoplasmic 1, intermediate chain 2a.
    
 
 0.732
S4RK02_PETMA
Uncharacterized protein.
    
 0.719
S4RLW1_PETMA
Ig-like domain-containing protein.
    
 0.719
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.