STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1035 aa)    
Predicted Functional Partners:
S4RJF9_PETMA
Uncharacterized protein.
   
0.899
S4R9M2_PETMA
ANK_REP_REGION domain-containing protein.
 
   
  0.854
S4RE56_PETMA
Uncharacterized protein.
 
      0.822
S4RK02_PETMA
Uncharacterized protein.
   
 0.750
S4RLW1_PETMA
Ig-like domain-containing protein.
   
 0.750
S4RJF2_PETMA
Sema domain-containing protein.
    
 0.679
S4RWV5_PETMA
Protein kinase domain-containing protein.
    
 0.679
S4RMG2_PETMA
Receptor-type tyrosine-protein phosphatase.
    
  0.656
S4RSD7_PETMA
Protein tyrosine phosphatase receptor type A.
    
  0.656
S4RN42_PETMA
Uncharacterized protein.
   
 0.649
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.