STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RR11_PETMAUncharacterized protein. (117 aa)    
Predicted Functional Partners:
S4RJF2_PETMA
Sema domain-containing protein.
   
 0.908
S4RWV5_PETMA
Protein kinase domain-containing protein.
   
 0.908
S4RS82_PETMA
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
 
      0.891
S4RNJ6_PETMA
RGS domain-containing protein.
    
 0.861
S4RUN1_PETMA
RGS domain-containing protein.
    
 0.861
S4R4K2_PETMA
Uncharacterized protein.
   
 0.840
S4RAK3_PETMA
Uncharacterized protein.
   
 0.840
S4RIU9_PETMA
EPH receptor B1.
   
 0.840
S4RPX4_PETMA
Uncharacterized protein.
   
 0.840
EPHB2
EPH receptor B2.
   
 0.840
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.