STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RR19_PETMACopper chaperone for superoxide dismutase. (269 aa)    
Predicted Functional Partners:
S4R4N3_PETMA
ATPase copper transporting beta.
  
 0.972
S4RAI8_PETMA
Uncharacterized protein.
  
 0.972
S4RXR6_PETMA
Uncharacterized protein.
  
 0.971
SODM_PETMA
Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
  
 
 0.926
S4RKK1_PETMA
Thioredoxin reductase 3.
    
 0.815
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
    
 0.815
S4R6K6_PETMA
Gephyrin.
    
  0.661
S4RBJ4_PETMA
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
  0.661
S4RJR1_PETMA
MoCF_biosynth domain-containing protein.
    
  0.661
S4RTX6_PETMA
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
    
  0.661
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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