STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RRA0_PETMAHGTP_anticodon domain-containing protein. (159 aa)    
Predicted Functional Partners:
S4RR77_PETMA
S1 motif domain-containing protein.
   
 0.961
EIF2AK4
Eukaryotic translation initiation factor 2 alpha kinase 4.
     
0.900
S4RXF5_PETMA
Aspartyl-tRNA synthetase 2, mitochondrial.
  
  
 0.893
S4RTM3_PETMA
tRNA-binding domain-containing protein.
  
 
 0.884
S4RAV2_PETMA
Eukaryotic translation initiation factor 2-alpha kinase 1.
     
 0.863
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 0.854
S4RJX2_PETMA
Threonyl-tRNA synthetase.
  
 
 0.834
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
    
 0.820
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
 
 0.805
S4R4M7_PETMA
Uncharacterized protein.
  
 
 0.805
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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