STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RRX9_PETMARetinoblastoma binding protein 4, like. (425 aa)    
Predicted Functional Partners:
S4RM85_PETMA
ARID domain-containing protein.
   
 0.999
S4RN39_PETMA
AT rich interactive domain 4A (RBP1-like).
   
 0.999
S4RP55_PETMA
Histone acetyltransferase 1.
   
 0.998
S4RZ66_PETMA
SUZ12 polycomb repressive complex 2 subunit a.
    
 0.998
S4R9E4_PETMA
Embryonic ectoderm development.
   
 0.993
S4R9I9_PETMA
Lin-37 DREAM MuvB core complex component.
    
 0.993
S4RI70_PETMA
Uncharacterized protein.
    
 0.992
S4RRA4_PETMA
Mortality factor 4 like 1.
   
 0.991
S4RIY0_PETMA
CHDNT domain-containing protein.
   
 0.989
S4RN58_PETMA
Retinoblastoma-like 1 (p107).
   
 0.985
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.