STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RRZ5_PETMADiphthamide biosynthesis 5. (114 aa)    
Predicted Functional Partners:
S4RUU7_PETMA
Diphthamide biosynthesis 5.
 
     0.938
S4RMH1_PETMA
Diphthine--ammonia ligase; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP.
  
 
 0.891
S4R800_PETMA
Tr-type G domain-containing protein.
    
 0.877
S4R5G1_PETMA
Uncharacterized protein.
   
 0.838
S4RWJ7_PETMA
Diphthamide biosynthesis 2.
   
 0.832
S4R4P3_PETMA
EFG_C domain-containing protein.
    
 0.708
S4RAJ6_PETMA
Elongation factor like GTPase 1.
    
 0.708
S4RT10_PETMA
Tr-type G domain-containing protein.
    
 0.708
S4RY45_PETMA
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
 
      0.634
S4RXT9_PETMA
RNA 3'-terminal phosphate cyclase.
   
  
 0.546
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.