STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RS11_PETMAAllograft inflammatory factor 1-like. (132 aa)    
Predicted Functional Partners:
S4RA42_PETMA
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.889
S4RZM4_PETMA
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.889
S4RAB0_PETMA
Serine/threonine-protein phosphatase.
    
 0.752
S4RMK2_PETMA
Uncharacterized protein.
   
 
 0.723
S4RVX9_PETMA
WD repeat domain 90.
   
 
 0.723
S4RND2_PETMA
Calcium/calmodulin-dependent protein kinase II alpha.
    
 0.704
S4RU19_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.704
S4R5P2_PETMA
Uncharacterized protein.
   
 0.690
S4RL37_PETMA
Troponin I type 2a (skeletal, fast), tandem duplicate 4.
   
 0.690
S4RPE7_PETMA
Uncharacterized protein.
   
 0.687
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.