STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RS62_PETMAUncharacterized protein. (503 aa)    
Predicted Functional Partners:
S4RIH0_PETMA
Collagen IV NC1 domain-containing protein.
 
   
  0.894
S4R7J7_PETMA
Uncharacterized protein.
   
 0.848
S4RK02_PETMA
Uncharacterized protein.
    
 0.834
S4RLW1_PETMA
Ig-like domain-containing protein.
    
 0.834
S4RL43_PETMA
Uncharacterized protein.
  
0.695
S4RA11_PETMA
Thioredoxin domain-containing protein.
    
  0.659
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.654
S4RSP9_PETMA
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a; Belongs to the serpin family.
    
 0.652
S4REC4_PETMA
Fe2OG dioxygenase domain-containing protein.
   
 0.634
S4RUT4_PETMA
Fe2OG dioxygenase domain-containing protein.
   
 0.634
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.