STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RS87_PETMASH3 domain-containing protein. (233 aa)    
Predicted Functional Partners:
S4R6P1_PETMA
Cbl-PTB domain-containing protein.
    
 0.987
S4RJF2_PETMA
Sema domain-containing protein.
   
 0.985
S4RWV5_PETMA
Protein kinase domain-containing protein.
   
 0.985
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.942
S4RJQ7_PETMA
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.940
UBB
Ubiquitin B.
    
  0.920
SH3GL1
SH3 domain containing GRB2 like 1, endophilin A2.
    
 0.873
SH3GL1-2
SH3 domain containing GRB2 like 1, endophilin A2.
    
 0.873
S4RVI7_PETMA
Growth factor receptor-bound protein 2a.
    
0.852
S4RTP7_PETMA
SH2 domain-containing protein.
    
 0.848
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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