STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RSC9_PETMAZgc:136930; Belongs to the intermediate filament family. (306 aa)    
Predicted Functional Partners:
S4R5F3_PETMA
RunxI domain-containing protein.
    
  0.571
S4R4N4_PETMA
Heat shock protein 90 alpha family class A member 1.
    
 0.564
S4R5N6_PETMA
TSC complex subunit 1b.
    
 0.564
S4RDV2_PETMA
Heat shock protein 90 alpha family class A member 1.
    
 0.564
S4REL5_PETMA
Uncharacterized protein.
    
 
 0.560
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.559
S4REI3_PETMA
Baculoviral IAP repeat containing 6.
    
 0.554
S4R7R0_PETMA
Heat shock protein 90, beta (grp94), member 1.
    
 0.546
S4RX81_PETMA
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.517
S4R6I6_PETMA
Uncharacterized protein.
    
 0.515
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.