STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RSL9_PETMASpinster homolog 1 (Drosophila). (467 aa)    
Predicted Functional Partners:
S4RIQ1_PETMA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
  0.806
S4RLN8_PETMA
FAD-binding FR-type domain-containing protein.
    
  0.806
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
    
 0.736
S4RQU7_PETMA
Thymidylate synthetase.
    
  0.601
S4RS80_PETMA
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.591
S4RYF8_PETMA
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.590
S4S1D7_PETMA
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.590
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
   
 0.515
S4RHN5_PETMA
Sulfite oxidase; Belongs to the cytochrome b5 family.
     
 0.487
S4RX62_PETMA
Aminotran_5 domain-containing protein.
  
 
 0.421
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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