STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RSZ6_PETMAStromal antigen 1a. (1190 aa)    
Predicted Functional Partners:
RAD21
RAD21 cohesin complex component.
   
 0.972
RAD21-2
RAD21 cohesin complex component.
   
 0.923
S4R566_PETMA
Structural maintenance of chromosomes protein.
   
 0.903
S4RBJ1_PETMA
SMC_N domain-containing protein.
   
 0.903
SMC1A
SMC hinge domain-containing protein.
   
 0.903
S4RPX9_PETMA
Uncharacterized protein.
   
 0.895
S4RX75_PETMA
Uncharacterized protein.
   
 0.895
S4RE17_PETMA
Si:dkey-119f1.1.
   
 0.866
S4RF76_PETMA
WAPL cohesin release factor a.
   
 0.863
ESPL1
Extra spindle pole bodies like 1, separase.
    
 0.854
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.