STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BET1LBet1 golgi vesicular membrane trafficking protein like. (113 aa)    
Predicted Functional Partners:
S4R9P7_PETMA
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.993
S4RMB2_PETMA
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.992
S4RDF4_PETMA
Uso1_p115_head domain-containing protein.
    
 0.974
S4RHG7_PETMA
Uncharacterized protein.
    
 0.974
S4RB81_PETMA
Syntaxin-5_N domain-containing protein.
   
 0.967
STX5
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.967
S4RVV5_PETMA
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.967
S4R908_PETMA
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
    
 0.966
S4RPV8_PETMA
SEC22 homolog A, vesicle trafficking protein; Belongs to the synaptobrevin family.
    
 0.961
S4RTF1_PETMA
V-SNARE coiled-coil homology domain-containing protein.
    
 
 0.854
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.