STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RTY8_PETMACWC15 spliceosome associated protein homolog. (147 aa)    
Predicted Functional Partners:
S4RKR2_PETMA
CDC5 cell division cycle 5-like (S. pombe).
   
 0.999
S4RS47_PETMA
Pleiotropic regulator 1.
   
 0.999
S4RK60_PETMA
Catenin, beta like 1.
    
 0.996
S4RTX3_PETMA
Uncharacterized protein.
   
 
 0.995
S4RJ64_PETMA
SEC63 domain-containing protein.
    
 
 0.991
S4RLF8_PETMA
Pre-mRNA processing factor 8.
    
 
 0.991
S4RN48_PETMA
WD_REPEATS_REGION domain-containing protein.
   
 
 0.989
S4RRE1_PETMA
Leucine rich repeat containing 51.
    
 
 0.989
S4RB87_PETMA
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.988
S4RS76_PETMA
RNA binding motif protein 22.
   
 
 0.971
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.