STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RU26_PETMAPRK domain-containing protein. (210 aa)    
Predicted Functional Partners:
S4RCP6_PETMA
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
 
 0.995
S4RR07_PETMA
Uncharacterized protein.
    
  0.983
S4R4Q6_PETMA
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
0.919
S4RF50_PETMA
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
    
 0.893
S4RIC2_PETMA
HMG box domain-containing protein.
    
 0.889
S4RZB8_PETMA
Uncharacterized protein.
   
 0.876
S4RJF2_PETMA
Sema domain-containing protein.
    
 0.870
S4RWV5_PETMA
Protein kinase domain-containing protein.
    
 0.870
S4RHW3_PETMA
Uncharacterized protein.
    
 0.861
S4RHX2_PETMA
Uncharacterized protein.
    
 0.861
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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