STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GUF1Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (438 aa)    
Predicted Functional Partners:
S4RMY0_PETMA
Ribosomal protein L12.
   
 
 0.990
S4RAC1_PETMA
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.989
S4RV86_PETMA
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.984
S4R4U3_PETMA
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.983
S4RA75_PETMA
Mitochondrial ribosomal protein L32.
  
 
 0.983
S4RWE1_PETMA
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
 
 
 0.983
S4RAQ9_PETMA
Ribosomal_L18_c domain-containing protein.
   
 
 0.981
S4RFB7_PETMA
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.981
S4RYY5_PETMA
Ribosomal protein L11.
   
 
 0.981
S4RBS3_PETMA
Mitochondrial ribosomal protein L15.
    
 
 0.980
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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