STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RUB1_PETMAPYNP_C domain-containing protein. (125 aa)    
Predicted Functional Partners:
S4RZE1_PETMA
Uncharacterized protein.
  
 0.933
S4RF50_PETMA
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
  
 
 0.926
S4RCP6_PETMA
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
  
 
 0.920
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.868
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
    
 0.861
S4RD44_PETMA
CEP44 domain-containing protein.
    
 0.859
S4RNY9_PETMA
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family.
    
 0.852
S4RSJ4_PETMA
Uncharacterized protein.
    
 0.843
S4RFC4_PETMA
Deoxyguanosine kinase.
    
 0.839
PNP
Purine nucleoside phosphorylase.
    
 0.812
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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