STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RUB7_PETMARRM domain-containing protein. (90 aa)    
Predicted Functional Partners:
S4RCA6_PETMA
CUGBP Elav-like family member 2.
 
      0.900
S4RQ57_PETMA
CUGBP Elav-like family member 2.
 
      0.900
S4RCV9_PETMA
RNA binding motif protein X-linked.
  
 
 
 0.644
S4RU54_PETMA
Transformer 2 alpha homolog.
  
 
 
 0.636
S4RCZ4_PETMA
Transformer 2 beta homolog.
  
 
 
 0.628
S4RER3_PETMA
RNA binding motif protein X-linked.
  
 
 
 0.624
HNRNPA0-2
Heterogeneous nuclear ribonucleoprotein A0.
  
 
 
 0.618
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
  
 
 
 0.606
S4RI42_PETMA
Uncharacterized protein.
  
 
 
 0.605
S4RMS9_PETMA
RNA binding motif protein 24a.
  
   
 0.605
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.