STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RUE3_PETMAUncharacterized protein. (667 aa)    
Predicted Functional Partners:
S4RHA5_PETMA
Laminin N-terminal domain-containing protein.
 
 
 0.987
S4RN94_PETMA
Uncharacterized protein.
 
 
 0.977
S4RWQ2_PETMA
Laminin N-terminal domain-containing protein.
 
 
 
 0.945
S4RGH4_PETMA
Uncharacterized protein.
 
 
 
 0.929
S4RER4_PETMA
Uncharacterized protein.
 
 
 0.896
S4RWQ1_PETMA
Uncharacterized protein.
   
0.883
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.866
S4RN02_PETMA
Uncharacterized protein.
   
0.854
S4RSM3_PETMA
Integrin beta; Belongs to the integrin beta chain family.
    
 0.852
S4R7J7_PETMA
Uncharacterized protein.
    
 0.849
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.