STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RUG0_PETMAUncharacterized protein. (194 aa)    
Predicted Functional Partners:
S4R5R3_PETMA
PHD-type domain-containing protein.
     
 0.539
S4R998_PETMA
Syntaphilin a.
  
     0.497
S4S1L5_PETMA
Neuropeptide Y; Belongs to the NPY family.
  
     0.480
S4S0W8_PETMA
Uncharacterized protein.
  
     0.468
S4RBL7_PETMA
Neurexophilin 2b.
  
     0.455
S4RY74_PETMA
FAM83 domain-containing protein.
  
     0.453
S4RFI7_PETMA
Neurexophilin 1.
  
     0.450
S4RJE2_PETMA
RING-type domain-containing protein.
  
     0.437
ENSPMAP00000010609
annotation not available
  
     0.437
S4R809_PETMA
HNF-1B_C domain-containing protein.
  
     0.436
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.