STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RUR4_PETMALHFPL tetraspan subfamily member 5b. (247 aa)    
Predicted Functional Partners:
S4RBK0_PETMA
Uncharacterized protein.
   
 0.865
S4RKS7_PETMA
Protocadherin-related 15b.
   
 0.865
S4RM36_PETMA
Uncharacterized protein.
   
  
 0.665
S4RA91_PETMA
Calcium and integrin binding family member 2.
     
 0.656
S4RZM6_PETMA
Calcium and integrin binding family member 2.
     
 0.656
S4R725_PETMA
Transmembrane channel-like protein.
   
 
 0.611
S4RA70_PETMA
Transmembrane channel-like protein.
   
 
 0.611
S4RWM9_PETMA
Si:dkey-15b23.3.
   
 
 0.611
S4R9Q2_PETMA
Uncharacterized protein.
   
 0.564
S4RP29_PETMA
Cadherin-related 23.
   
 0.564
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.