STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RUS1_PETMAUncharacterized protein. (343 aa)    
Predicted Functional Partners:
S4RK36_PETMA
Uncharacterized protein.
      
 0.485
S4R4T2_PETMA
WW domain-containing protein.
      
 0.482
KIF20A
Kinesin family member 20A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.481
S4S1R0_PETMA
Dopamine receptor D1b; Belongs to the G-protein coupled receptor 1 family.
      
 0.472
S4S1F1_PETMA
DPH-type MB domain-containing protein.
      
 0.463
S4RWJ7_PETMA
Diphthamide biosynthesis 2.
      
 0.420
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.