STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RV37_PETMAImmediate early response 3 interacting protein 1. (82 aa)    
Predicted Functional Partners:
S4RTX4_PETMA
Protein YIPF.
   
 
 0.708
S4REB6_PETMA
Protein YIPF.
   
 
 0.617
S4R7Y6_PETMA
Yip1 interacting factor homolog A (S. cerevisiae).
    
 
 0.493
S4RYR6_PETMA
Yip1 interacting factor homolog B (S. cerevisiae).
    
 
 0.493
S4RVC9_PETMA
Protein YIPF.
      
 0.475
S4RSN9_PETMA
Protein kish; Involved in the early part of the secretory pathway.
   
   0.474
S4RIF1_PETMA
PRA1 family protein.
      
 0.446
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.