STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RVS8_PETMATUB bipartite transcription factor; Belongs to the TUB family. (227 aa)    
Predicted Functional Partners:
S4RS46_PETMA
Tetratricopeptide repeat domain 21B.
    
 0.790
IFT122
Intraflagellar transport 122.
    
 0.789
S4RZK2_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.783
S4RCS6_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.770
S4RT27_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.738
S4RIS7_PETMA
G protein-coupled receptor 161.
     
 0.625
S4RUG2_PETMA
Uncharacterized protein.
    
 
 0.502
S4RVI7_PETMA
Growth factor receptor-bound protein 2a.
 
  
   0.502
S4RZP3_PETMA
RING-type domain-containing protein.
   
 0.497
S4R882_PETMA
TBC1 domain family, member 5.
    
 
 0.478
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.