STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RWV7_PETMAPLAC domain-containing protein. (165 aa)    
Predicted Functional Partners:
S4R8T0_PETMA
Peptidase M12B domain-containing protein.
 
     0.929
S4RTP6_PETMA
ADAM_spacer1 domain-containing protein.
 
   
 0.925
S4RB46_PETMA
Uncharacterized protein.
 
   
0.914
S4RWY4_PETMA
Uncharacterized protein.
 
 
  0.904
S4RRL5_PETMA
Peptidase M12B domain-containing protein.
 
   
 0.883
S4RIE7_PETMA
Peptidase M12B domain-containing protein.
 
 
  0.876
S4RYA5_PETMA
ADAMTS like 5.
 
   
 0.855
S4RD10_PETMA
Peptidase M12B domain-containing protein.
 
 
  0.846
S4RIP6_PETMA
ADAM metallopeptidase with thrombospondin type 1 motif, 17.
 
 
  0.844
S4RH91_PETMA
Uncharacterized protein.
    
 0.588
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.