STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RXS5_PETMAPellino E3 ubiquitin protein ligase family member 2. (170 aa)    
Predicted Functional Partners:
S4RT09_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.908
S4R4V7_PETMA
Interleukin-1 receptor-associated kinase 4.
    
 0.889
S4RMR7_PETMA
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.848
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 0.774
S4R701_PETMA
Uncharacterized protein.
    
 0.738
S4RDZ2_PETMA
Uncharacterized protein.
    
 0.706
S4R8Q3_PETMA
Protein kinase domain-containing protein.
    
 0.652
S4R8V8_PETMA
Protein kinase domain-containing protein.
    
 0.652
S4RDA4_PETMA
Protein kinase domain-containing protein.
    
 0.652
S4RG58_PETMA
Uncharacterized protein.
    
 0.652
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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